BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D02SP1|AL426672
(772 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1481 1530 0.0
>3x_Contig1481
Length = 8252
Score = 1530 bits (772), Expect = 0.0
Identities = 772/772 (100%)
Strand = Plus / Plus
Query: 1 aggcctatacttgagattagatgagatgtgtttaaacttcaattgcttgttgtactgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 aggcctatacttgagattagatgagatgtgtttaaacttcaattgcttgttgtactgatt 1354
Query: 61 tgtgttgtgtttttattttattatatgttgtaattgaatcttcttctcagatccccagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1355 tgtgttgtgtttttattttattatatgttgtaattgaatcttcttctcagatccccagta 1414
Query: 121 acgtagcaatctatcaaccatggctttcatcaaggacatcaagacctctgcttaccactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1415 acgtagcaatctatcaaccatggctttcatcaaggacatcaagacctctgcttaccactc 1474
Query: 181 cagataccaaactccattcagaagaagaagagaaggtaagactgactactatgccagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1475 cagataccaaactccattcagaagaagaagagaaggtaagactgactactatgccagaaa 1534
Query: 241 gagattagtcgctcaacacaaggctaagtacaacactccaaagtacagattggttgttag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1535 gagattagtcgctcaacacaaggctaagtacaacactccaaagtacagattggttgttag 1594
Query: 301 attcaccaacaaggacatcatcacccaaatcgtctcttctaccatcactggtgacattgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1595 attcaccaacaaggacatcatcacccaaatcgtctcttctaccatcactggtgacattgt 1654
Query: 361 tttggccgctgcttactctcacgaactaccaagatacggtattacccatggtttgactaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1655 tttggccgctgcttactctcacgaactaccaagatacggtattacccatggtttgactaa 1714
Query: 421 ctggtctgctgcttacgctaccggtttgttgttggccagaagaactttgcaaaagttggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1715 ctggtctgctgcttacgctaccggtttgttgttggccagaagaactttgcaaaagttggg 1774
Query: 481 tttggacgaaacctacccaggtgttgaagaagttgaaggtgaatacgaattgaccgaagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1775 tttggacgaaacctacccaggtgttgaagaagttgaaggtgaatacgaattgaccgaagc 1834
Query: 541 tgttgaagacggtccaagaccattcaaggtctacttggatgtcggtttgcaaagaaccac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1835 tgttgaagacggtccaagaccattcaaggtctacttggatgtcggtttgcaaagaaccac 1894
Query: 601 caccggtgccagaatcttcggtgctttgaagggtgcttctgacggtggtttgtacgttcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1895 caccggtgccagaatcttcggtgctttgaagggtgcttctgacggtggtttgtacgttcc 1954
Query: 661 tcactctgaaaacagattcccaggttgggacttcgaagctgaagaattggacgctgattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1955 tcactctgaaaacagattcccaggttgggacttcgaagctgaagaattggacgctgattt 2014
Query: 721 gttgagaacttacatcttcggtggtcacgtttcccaatacatggaagaattg 772
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2015 gttgagaacttacatcttcggtggtcacgtttcccaatacatggaagaattg 2066
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6923
Number of Sequences: 1807
Number of extensions: 6923
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 772
length of database: 10,358,551
effective HSP length: 16
effective length of query: 756
effective length of database: 10,329,639
effective search space: 7809207084
effective search space used: 7809207084
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)